libsequence  1.9.5
Bibliography
[1]

F Depaulis and M Veuille. Neutrality tests based on the distribution of haplotypes under an infinite-site model. Mol. Biol. Evol., 15(12):1788–1790, December 1998.

[2]

J C Fay and C I Wu. Hitchhiking under positive darwinian selection. Genetics, 155(3):1405–1413, July 2000.

[3]

Anna Ferrer-Admetlla, Mason Liang, Thorfinn Korneliussen, and Rasmus Nielsen. On detecting incomplete soft or hard selective sweeps using haplotype structure. Mol. Biol. Evol., 31(5):1275–1291, May 2014.

[4]

Nandita R Garud, Philipp W Messer, Erkan O Buzbas, and Dmitri A Petrov. Recent selective sweeps in north american drosophila melanogaster show signatures of soft sweeps. PLoS Genet., 11(2):e1005004, February 2015.

[5]

R R Hudson and N L Kaplan. Statistical properties of the number of recombination events in the history of a sample of DNA sequences. Genetics, 111(1):147–164, September 1985.

[6]

F Tajima. Evolutionary relationship of DNA sequences in finite populations. Genetics, 105(2):437–460, October 1983.

[7]

F Tajima. Statistical method for testing the neutral mutation hypothesis by DNA polymorphism. Genetics, 123(3):585–595, November 1989.

[8]

Kevin Thornton. Libsequence: a c++ class library for evolutionary genetic analysis. Bioinformatics, 19(17):2325–2327, November 2003.

[9]

G A Watterson. On the number of segregating sites in genetical models without recombination. Theor. Popul. Biol., 7(2):256–276, April 1975.

[10]

Kai Zeng, Yun-Xin Fu, Suhua Shi, and Chung-I Wu. Statistical tests for detecting positive selection by utilizing high-frequency variants. Genetics, 174(3):1431–1439, November 2006.