libsequence
1.9.5
Sequence::ClustalW< T > Member List
This is the complete list of members for
Sequence::ClustalW< T >
, including all inherited members.
AlignStream
(const std::vector< T > &_data) (defined in
Sequence::AlignStream< T >
)
Sequence::AlignStream< T >
AlignStream
(std::vector< T > &&_data) (defined in
Sequence::AlignStream< T >
)
Sequence::AlignStream< T >
AlignStream
(const AlignStream< T > &a) (defined in
Sequence::AlignStream< T >
)
Sequence::AlignStream< T >
AlignStream
(AlignStream< T > &&a) (defined in
Sequence::AlignStream< T >
)
Sequence::AlignStream< T >
AlignStream
(void) (defined in
Sequence::AlignStream< T >
)
Sequence::AlignStream< T >
inline
assign
(const_iterator beg, const_iterator end)
Sequence::AlignStream< T >
assign
(std::vector< T > &&_data)
Sequence::AlignStream< T >
begin
() (defined in
Sequence::AlignStream< T >
)
Sequence::AlignStream< T >
begin
() const (defined in
Sequence::AlignStream< T >
)
Sequence::AlignStream< T >
ClustalW
(void) (defined in
Sequence::ClustalW< T >
)
Sequence::ClustalW< T >
inline
ClustalW
(const AlignStream< T > &a) (defined in
Sequence::ClustalW< T >
)
Sequence::ClustalW< T >
inline
ClustalW
(const ClustalW< T > &a) (defined in
Sequence::ClustalW< T >
)
Sequence::ClustalW< T >
inline
ClustalW
(const std::vector< T > &a) (defined in
Sequence::ClustalW< T >
)
Sequence::ClustalW< T >
inline
ClustalW
(AlignStream< T > &&a) (defined in
Sequence::ClustalW< T >
)
Sequence::ClustalW< T >
inline
ClustalW
(ClustalW< T > &&a) (defined in
Sequence::ClustalW< T >
)
Sequence::ClustalW< T >
inline
ClustalW
(std::vector< T > &&a) (defined in
Sequence::ClustalW< T >
)
Sequence::ClustalW< T >
inline
const_iterator
typedef
Sequence::AlignStream< T >
const_reference
typedef (defined in
Sequence::AlignStream< T >
)
Sequence::AlignStream< T >
Data
(void) (defined in
Sequence::AlignStream< T >
)
Sequence::AlignStream< T >
empty
() const
Sequence::AlignStream< T >
inline
end
() (defined in
Sequence::AlignStream< T >
)
Sequence::AlignStream< T >
end
() const (defined in
Sequence::AlignStream< T >
)
Sequence::AlignStream< T >
Gapped
(void) (defined in
Sequence::AlignStream< T >
)
Sequence::AlignStream< T >
IsAlignment
(void) (defined in
Sequence::AlignStream< T >
)
Sequence::AlignStream< T >
iterator
typedef
Sequence::AlignStream< T >
operator=
(const AlignStream< T > &rhs) (defined in
Sequence::ClustalW< T >
)
Sequence::ClustalW< T >
inline
operator[]
(const size_type &i)
Sequence::AlignStream< T >
inline
operator[]
(const size_type &i) const
Sequence::AlignStream< T >
inline
print
(std::ostream &s) const
Sequence::ClustalW< T >
virtual
read
(std::istream &s)
Sequence::ClustalW< T >
virtual
reference
typedef (defined in
Sequence::AlignStream< T >
)
Sequence::AlignStream< T >
RemoveGaps
(void) (defined in
Sequence::AlignStream< T >
)
Sequence::AlignStream< T >
RemoveTerminalGaps
(void) (defined in
Sequence::AlignStream< T >
)
Sequence::AlignStream< T >
size
(void) const
Sequence::AlignStream< T >
inline
size_type
typedef (defined in
Sequence::AlignStream< T >
)
Sequence::AlignStream< T >
Trim
(std::vector< int >sites) (defined in
Sequence::AlignStream< T >
)
Sequence::AlignStream< T >
TrimComplement
(std::vector< int >sites) (defined in
Sequence::AlignStream< T >
)
Sequence::AlignStream< T >
UnGappedLength
(void) (defined in
Sequence::AlignStream< T >
)
Sequence::AlignStream< T >
~ AlignStream
(void) (defined in
Sequence::AlignStream< T >
)
Sequence::AlignStream< T >
virtual
~ClustalW
(void) (defined in
Sequence::ClustalW< T >
)
Sequence::ClustalW< T >
inline
Generated on Thu Sep 13 2018 15:07:05 for libsequence by
1.8.13