Changes

Version 0.2.2

• Package refactored into a single namespace
• Build system now uses cmake
• libsequence is included as a git submodule, removing all compilation dependencies except pybind11
• A VariantMatrix may now be constructed from numpy arrays without making copies
• Taking a window of a VariantMatrix is now copy-free

Bug fixes

• This release fixes a small bug in calculating number of haplotypes, haplotype diversity, etc.. See libsequence Issue 59 for details.

Version 0.2.1

• Added libsequence.summstats.omega_max()
• Added libsequence.polytable.SimData.from_stdin()