libsequence  1.9.5
msstats.cc
/*
msstats - read data from ms via stdin, calculate common summary statistics
Copyright (C) 2002 Kevin Thornton
This program is free software; you can redistribute it and/or modify
it under the terms of the GNU General Public License as published by
the Free Software Foundation; either version 2, or (at your option)
any later version.
This program is distributed in the hope that it will be useful,
but WITHOUT ANY WARRANTY; without even the implied warranty of
MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
GNU General Public License for more details.
You should have received a copy of the GNU General Public License
along with this program; if not, write to the Free Software Foundation,
Inc., 59 Temple Place - Suite 330, Boston, MA 02111-1307, USA.
*/
#include <iostream>
#include <vector>
#include <cstdio>
using namespace std;
using namespace Sequence;
int main(int argc, char *argv[])
{
cin >> p;
std::ios_base::sync_with_stdio(true);
int rv;
while( (rv = d.fromfile(stdin)) != EOF )
{
PolySIM P(&d);
cout <<P.NumPoly() << '\t'
<< P.ThetaW() << '\t'
<< P.ThetaPi() << '\t'
<< P.ThetaH() << '\t'
<< P.TajimasD() << '\t'
<< P.FuLiD() << '\t'
<< P.FuLiF() << '\t'
<< P.FuLiDStar() << '\t'
<< P.FuLiFStar() << endl;
}
}