SingleSub.hpp

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/*

  Copyright (C) 2003-2009 Kevin Thornton, krthornt[]@[]uci.edu

  Remove the brackets to email me.

  This file is part of libsequence.

  libsequence is free software: you can redistribute it and/or modify
  it under the terms of the GNU General Public License as published by
  the Free Software Foundation, either version 3 of the License, or
  (at your option) any later version.

  libsequence is distributed in the hope that it will be useful,
  but WITHOUT ANY WARRANTY; without even the implied warranty of
  MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
  GNU General Public License for more details.

  You should have received a copy of the GNU General Public License
  long with libsequence.  If not, see <http://www.gnu.org/licenses/>.

*/

#ifndef SINGLESUB_H
#define SINGLESUB_H

#include <string>
#include <memory>
namespace Sequence
{
  class RedundancyCom95;
    
  class SingleSub
  {
  private:
    struct SingleSubImpl;
    std::unique_ptr<SingleSubImpl> impl;
  public:
    explicit SingleSub(void);
    void operator()(const RedundancyCom95 & sitesObj,
                    const std::string &cod1,
                    const std::string &cod2);
    ~SingleSub();
    double P0(void) const;
    double P2S(void) const;
    double P2V(void) const;
    double P4(void) const;
    double Q0(void) const;
    double Q2S(void) const;
    double Q2V(void) const;
    double Q4(void) const;
  };
}
#endif