Sequence::AlleleCountMatrix Class Reference

Matrix representation of allele counts in a VariantMatrix To be constructed. More...

#include <AlleleCountMatrix.hpp>

Public Types
using	value_type = std::vector< std::int32_t >::value_type

Public Member Functions
	AlleleCountMatrix (const VariantMatrix &m)
template<typename T >
	AlleleCountMatrix (T &&t, const std::size_t nc_, const std::size_t nr_, const std::size_t n_)
std::pair< std::vector< std::int32_t >::const_iterator, std::vector< std::int32_t >::const_iterator >	row (const std::size_t) const

Public Attributes
const std::vector< std::int32_t >	counts
const std::size_t	ncol
const std::size_t	nrow
const std::size_t	nsam

Detailed Description

Matrix representation of allele counts in a VariantMatrix To be constructed.

Definition at line 12 of file AlleleCountMatrix.hpp.

Constructor & Destructor Documentation

AlleleCountMatrix()

template<typename T >

Sequence::AlleleCountMatrix::AlleleCountMatrix ( T &&  t, const std::size_t  nc_, const std::size_t  nr_, const std::size_t  n_  )

inline

This constructor is for advanced use only, such as constructing from a slice of a pre-existing AlleleCountMatrix.

Definition at line 31 of file AlleleCountMatrix.hpp.

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The documentation for this class was generated from the following files:

• AlleleCountMatrix.hpp
• AlleleCountMatrix.cc