3 #include <boost/test/unit_test.hpp> 10 BOOST_AUTO_TEST_SUITE(stateCounterTest)
12 BOOST_AUTO_TEST_CASE( test1 )
15 auto y = for_each(begin(x),end(x),
17 BOOST_CHECK_EQUAL(y.a,1);
18 BOOST_CHECK_EQUAL(y.g,1);
19 BOOST_CHECK_EQUAL(y.c,1);
20 BOOST_CHECK_EQUAL(y.t,1);
21 BOOST_CHECK_EQUAL(y.n,1);
22 BOOST_CHECK_EQUAL(y.gap,1);
23 BOOST_CHECK_EQUAL(y.ndna,0);
25 BOOST_AUTO_TEST_SUITE_END()
keep track of state counts at a site in an alignment or along a sequence
The namespace in which this library resides.
declaration of Sequence::stateCounter, a class to keep track of nucleotide counts either at a site in...