stateCounter.hpp File Reference

declaration of Sequence::stateCounter, a class to keep track of nucleotide counts either at a site in an alignment, or along a sequence More...

#include <functional>

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Namespaces
	Sequence
	The namespace in which this library resides.

Functions
class	Sequence::__attribute__ ((deprecated)) countStates
	Functor to count the number of states, excluding gaps and missing data, in a range of characters. More...

Detailed Description

declaration of Sequence::stateCounter, a class to keep track of nucleotide counts either at a site in an alignment, or along a sequence

Definition in file stateCounter.hpp.