Functor to count the number of derived states, excluding gaps and missing data, in a range of characters. More...

Public Member Functions
template<typename charItr >
stateCounter	operator() (charItr beg, charItr end, const bool &haveOutgroup=true, const size_t &outgroup=0)

Detailed Description

Functor to count the number of derived states, excluding gaps and missing data, in a range of characters.

Definition at line 82 of file PolyFunctional.hpp.

Member Function Documentation

template<typename charItr >

stateCounter Sequence::countDerivedStates::operator()	(	charItr	beg,
		charItr	end,
		const bool &	haveOutgroup = `true`,
		const size_t &	outgroup = `0`
	)

inline

Parameters

beg	beginning of a range of characters
end	end of a range of characters
haveOutgroup	true of one of the elements of site is an outgroup state, false otherwise
outgroup	the index of the outgroup sequence in site

Note: will return an empty object if beg>=end or beg+outgroup>=end or haveOutgroup==false

Definition at line 89 of file PolyFunctional.hpp.

The documentation for this struct was generated from the following file: