AlignStreamTest.cc File Reference

unit tests for Sequence::ClustalW and Sequence::phylipData More...

#include <Sequence/Fasta.hpp>
#include <Sequence/Clustalw.hpp>
#include <Sequence/phylipData.hpp>
#include <boost/test/unit_test.hpp>
#include <fstream>
#include <iostream>
#include <unistd.h>

Go to the source code of this file.

Typedefs
using	clustal = Sequence::ClustalW< Sequence::Fasta >
using	phylip = Sequence::phylipData< Sequence::Fasta >

Functions
	BOOST_AUTO_TEST_CASE (from_vector1)
	BOOST_AUTO_TEST_CASE (from_vector2)
	BOOST_AUTO_TEST_CASE (from_vector3)
	BOOST_AUTO_TEST_CASE (from_vector4)
	BOOST_AUTO_TEST_CASE (copy_construct1)
	BOOST_AUTO_TEST_CASE (copy_construct2)
	BOOST_AUTO_TEST_CASE (move_construct1)
	BOOST_AUTO_TEST_CASE (move_construct2)
	BOOST_AUTO_TEST_CASE (move_construct3)
	BOOST_AUTO_TEST_CASE (move_construct4)
	BOOST_AUTO_TEST_CASE (should_throw1)
	BOOST_AUTO_TEST_CASE (should_throw2)
	BOOST_AUTO_TEST_CASE (should_throw3)
	BOOST_AUTO_TEST_CASE (clustalw_in)
	BOOST_AUTO_TEST_CASE (phylip_in)
	BOOST_AUTO_TEST_CASE (clustalw_convert)
	BOOST_AUTO_TEST_CASE (clustalw_convert2)
	BOOST_AUTO_TEST_CASE (clustalw_reread)
	BOOST_AUTO_TEST_CASE (convert_write_read)

Detailed Description

unit tests for Sequence::ClustalW and Sequence::phylipData

Definition in file AlignStreamTest.cc.