Sequence::coalsim::segment Struct Reference

A portion of a recombining chromosome. More...

#include <Sequence/Coalescent/SimTypes.hpp>

Public Member Functions
	segment ()
	default constructor initializes all members to 0
	segment (const int &b, const int &e, const int &d)
	constructor More...

Public Attributes
int	beg
int	end
int	desc

Detailed Description

A portion of a recombining chromosome.

A segment is a portion of a recombining chromosome. A segment is defined in terms of its mutational length. Therefore, a segment consisting of k sites has k-1 positions at which recombination events can occur.

This struct contains 3 public members:

• beg: the first site in the segment
• end: the last site in the segment
• desc: the individual in the sample to which the segment leads

Definition at line 83 of file SimTypes.hpp.

Constructor & Destructor Documentation

segment()

Sequence::coalsim::segment::segment ( const int &  b, const int &  e, const int &  d = 0  )

explicit

constructor

Parameters

b	beg
e	end
d	desc

Definition at line 40 of file CoalescentSimTypes.cc.

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The documentation for this struct was generated from the following files:

• SimTypes.hpp
• CoalescentSimTypes.cc