libsequence
1.9.5
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A collection of function objects for SNP analysis. More...
#include <Sequence/stateCounter.hpp>
#include <Sequence/typedefs.hpp>
#include <vector>
#include <string>
#include <utility>
Go to the source code of this file.
Classes | |
struct | Sequence::countDerivedStates |
Functor to count the number of derived states, excluding gaps and missing data, in a range of characters. More... | |
class | Sequence::nmuts< counter > |
Calculate the number of mutations at a polymorphic site. More... | |
Namespaces | |
Sequence | |
The namespace in which this library resides. | |
Functions | |
class | Sequence::__attribute__ ((deprecated)) countStates |
Functor to count the number of states, excluding gaps and missing data, in a range of characters. More... | |
A collection of function objects for SNP analysis.
These objects may be useful for certain one-off calculations in lieu of Sequence::PolySNP. They are also useful guides for how to implement functors that can be used in conjunction with STL algorithms to do calculations on objects of type Sequence::PolyTable. This file declares Sequence::countStates, Sequence::countDerivedStates,Sequence::ssh, and Sequence::nmuts.
Definition in file PolyFunctional.hpp.