nvariablesites.hpp File Reference

Calculate total numbers of polymorphisms. More...

#include <cstdint>
#include <Sequence/AlleleCountMatrix.hpp>

Go to the source code of this file.

Namespaces
	Sequence
	The namespace in which this library resides.

Functions
std::uint32_t	Sequence::nvariable_sites (const AlleleCountMatrix &m)
	Number of polymorphic sites. More...
std::uint32_t	Sequence::nbiallelic_sites (const AlleleCountMatrix &m)
	Number of bi-allelic sites. More...
std::uint32_t	Sequence::total_number_of_mutations (const AlleleCountMatrix &m)
	Total number of mutations in the sample. More...

Detailed Description

Calculate total numbers of polymorphisms.

Definition in file nvariablesites.hpp.